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Profile on ResearchGate

Forschungsgebiete

  • Hardware Beschleuniger

Lebenslauf

  • seit 2015

    DAAD Stipendiat bei der Fachgruppe Eingebettete Systeme und ihre Anwendungen (ESA)

  • 2010-2013

    M.Sc. Electronic Engineering, Politecnico di Torino (Italy)

  • 2004-2009

    B.Sc. Electronic Engineering, Universidad Nacional de Ingenieria (Peru)

Publications

  1. Sommer, L., Stock, F., Solis-Vasquez, L., and Koch, A. (2020). DAPHNE - An Automotive Benchmark Suite for Parallel Programming Models on Embedded Heterogeneous Platforms. In D. Ziegenbein, S. Saidi, X. S. Hu, and S. Steinhorst (Eds.), Future Automotive HW/SW Platform Design (Dagstuhl Seminar 19502), Dagstuhl Reports (Vol. 9, pp. 28–66). Dagstuhl, Germany: Schloss Dagstuhl–Leibniz-Zentrum fuer Informatik. doi: 10.4230/DagRep.9.12.28
    Preprint
    Bibtex
    @inproceedings{sommer2020dagstuhl,
      author = {Sommer, Lukas and Stock, Florian and Solis-Vasquez, Leonardo and Koch, Andreas},
      title = {DAPHNE - An Automotive Benchmark Suite for Parallel Programming Models on Embedded Heterogeneous Platforms},
      booktitle = {{{Future Automotive HW/SW Platform Design (Dagstuhl Seminar 19502)}}},
      year = {2020},
      editor = {Ziegenbein, Dirk and Saidi, Selma and Hu, Xiaobo Sharon and Steinhorst, Sebastian},
      volume = {9},
      series = {Dagstuhl Reports},
      pages = {28--66},
      publisher = {{Schloss Dagstuhl--Leibniz-Zentrum fuer Informatik}},
      address = {Dagstuhl, Germany},
      url = {https://drops.dagstuhl.de/opus/volltexte/2020/12010},
      urn = {urn:nbn:de:0030-drops-120101},
      doi = {10.4230/DagRep.9.12.28},
      annote = {Keywords: automotive, hw/sw platforms, real-time systems, systems design automation},
      preprint = {http://dx.doi.org/10.4230/DagRep.9.12.28}
    }
    
  2. Solis-Vasquez, L., Santos-Martins, D., Koch, A., and Forli, S. (2020). Evaluating the Energy Efficiency of OpenCL-accelerated AutoDock Molecular Docking. In 28th EUROMICRO International Conference on Parallel, Distributed and Network-Based Processing (PDP’20).
    Preprint
    Bibtex
    @inproceedings{solis2020pdp,
      author = {Solis-Vasquez, Leonardo and Santos-Martins, Diogo and Koch, Andreas and Forli, Stefano},
      booktitle = {28th EUROMICRO International Conference on Parallel, Distributed and Network-Based Processing (PDP'20)},
      title = {Evaluating the Energy Efficiency of OpenCL-accelerated AutoDock Molecular Docking},
      year = {2020}
    }
    
  3. Sommer, L., Stock, F., Solis-Vasquez, L., and Koch, A. (2020). Using Parallel Programming Models for Automotive Workloads on Heterogeneous Systems - a Case Study. In 28th EUROMICRO International Conference on Parallel, Distributed and Network-Based Processing (PDP’20).
    Preprint
    Bibtex
    @inproceedings{sommer2020pdp,
      author = {Sommer, Lukas and Stock, Florian and Solis-Vasquez, Leonardo and Koch, Andreas},
      booktitle = {28th EUROMICRO International Conference on Parallel, Distributed and Network-Based Processing (PDP'20)},
      title = {Using Parallel Programming Models for Automotive Workloads on Heterogeneous Systems - a Case Study},
      year = {2020},
      keywords = {embedded, automotive, parallel programming, heterogeneous, OpenMP, OpenCL, CUDA}
    }
    
  4. Solis-Vasquez, L. (2019). Accelerating Molecular Docking by Parallelized Heterogeneous Computing - A Case Study of Performance, Quality of Results, and Energy-Efficiency using CPUs, GPUs, and FPGAs (PhD thesis). Technische Universität Darmstadt, Germany.
    Preprint
    Bibtex
    @phdthesis{solis2019diss,
      author = {Solis-Vasquez, Leonardo},
      title = {Accelerating Molecular Docking by Parallelized Heterogeneous Computing - 
                     A Case Study of Performance, Quality of Results, and Energy-Efficiency 
                     using CPUs, GPUs, and FPGAs},
      school = {Technische Universität Darmstadt, Germany},
      year = {2019},
      preprint = {https://tuprints.ulb.tu-darmstadt.de/9288/}
    }
    
  5. Santos-Martins, D., Eberhardt, J., Bianco, G., Solis-Vasquez, L., Ambrosio, F. A., Koch, A., and Forli, S. (2019). D3R Grand Challenge 4: prospective pose prediction of BACE1 ligands with AutoDock-GPU. Journal of Computer-Aided Molecular Design.
    Preprint
    Bibtex
    @article{santosmartins2019posepred,
      title = {D3R Grand Challenge 4: prospective pose prediction of BACE1 ligands with AutoDock-GPU},
      author = {Santos-Martins, Diogo and Eberhardt, Jerome and Bianco, Giulia and Solis-Vasquez, Leonardo and Ambrosio, Francesca Alessandra and Koch, Andreas and Forli, Stefano},
      journal = {Journal of Computer-Aided Molecular Design},
      year = {2019},
      preprint = {https://doi.org/10.1007/s10822-019-00241-9}
    }
    
  6. El Khoury, L., Santos-Martins, D., Sasmal, S., Eberhardt, J., Bianco, G., Ambrosio, F. A., Solis-Vasquez, L., et al. (2019). Comparison of affinity ranking using AutoDock-GPU and MM-GBSA scores for BACE-1 inhibitors in the D3R Grand Challenge 4. Journal of Computer-Aided Molecular Design.
    Preprint
    Bibtex
    @article{elkhoury2019affrank,
      title = {Comparison of affinity ranking using AutoDock-GPU and MM-GBSA scores for BACE-1 inhibitors in the D3R Grand Challenge 4},
      author = {El Khoury, L{\'e}a and Santos-Martins, Diogo and Sasmal, Sukanya and Eberhardt, J{\'e}r{\^o}me and Bianco, Giulia and Ambrosio, Francesca Alessandra and Solis-Vasquez, Leonardo and Koch, Andreas and Forli, Stefano and Mobley, David L.},
      journal = {Journal of Computer-Aided Molecular Design},
      year = {2019},
      preprint = {https://doi.org/10.1007/s10822-019-00240-w}
    }
    
  7. Sommer, L., Stock, F., Solis-Vasquez, L., and Koch, A. (2019). Work-in-Progress: DAPHNE - Automotive Benchmark Suite for Parallel Programming Models on Embedded Heterogeneous Platforms. In Proceedings of the International Conference on Embedded Software (accepted for publication 07/2019), EMSOFT ’19. Piscataway, NJ, USA: IEEE Press.
    Preprint
    Bibtex
    @inproceedings{emsoft2019,
      author = {Sommer, Lukas and Stock, Florian and Solis-Vasquez, Leonardo and Koch, Andreas},
      title = {Work-in-Progress: DAPHNE - Automotive Benchmark Suite for Parallel Programming Models on Embedded Heterogeneous Platforms},
      booktitle = {Proceedings of the International Conference on Embedded Software (accepted for publication 07/2019)},
      series = {EMSOFT '19},
      year = {2019},
      location = {New York, NY, USA},
      publisher = {IEEE Press},
      address = {Piscataway, NJ, USA}
    }
    
  8. Sommer, L., Stock, F., Solis-Vasquez, L., and Koch, A. (2019). EPHoS: Evaluation of Programming - Models for Heterogeneous Systems. FAT-Schriftenreihe 317. Forschungsvereinigung Automobiltechik.
    Preprint
    Bibtex
    @article{fat317,
      title = {EPHoS: Evaluation of Programming - Models for Heterogeneous Systems},
      author = {Sommer, Lukas and Stock, Florian and Solis-Vasquez, Leonardo and Koch, Andreas},
      booktitle = {FAT-Schriftenreihe 317},
      year = {2019},
      publisher = {Forschungsvereinigung Automobiltechik},
      preprint = {https://www.vda.de/de/services/Publikationen/fat-schriftenreihe-317.html}
    }
    
  9. Solis-Vasquez, L., and Koch, A. (2018). A Case Study in Using OpenCL on FPGAs: Creating an Open-Source Accelerator of the AutoDock Molecular Docking Software . In Fifth International Workshop on FPGAs for Software Programmers (FSP).
    Preprint Material
    Bibtex
    @inproceedings{solis-vasquez2018acsuoclfpgacosaadmds,
      title = {A Case Study in Using OpenCL on FPGAs: Creating an Open-Source Accelerator of the AutoDock Molecular Docking Software },
      author = {Solis-Vasquez, Leonardo and Koch, Andreas},
      booktitle = {Fifth International Workshop on FPGAs for Software Programmers (FSP)},
      year = {2018},
      material = {https://git.esa.informatik.tu-darmstadt.de/docking/ocladock-fpga}
    }
    
  10. Solis-Vasquez, L., and Koch, A. (2017). A Performance and Energy Evaluation of OpenCL-accelerated Molecular Docking. In Fifth International Workshop on OpenCL (IWOCL).
    Preprint Material
    Bibtex
    @inproceedings{solis-vasquez2017apeeoclmd,
      title = {A Performance and Energy Evaluation of OpenCL-accelerated Molecular Docking},
      author = {Solis-Vasquez, Leonardo and Koch, Andreas},
      booktitle = {Fifth International Workshop on OpenCL (IWOCL)},
      year = {2017},
      material = {https://git.esa.informatik.tu-darmstadt.de/docking/ocladock}
    }