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Profiles

Research Interests

  • High performance computing
  • Hardware acceleration
  • Parallel programming

Short CV

  • Since 2020

    Research Associate at the Embedded Systems and Applications (ESA) group

  • 2015-2019

    Ph.D. Computer Science, TU Darmstadt

  • 2010-2013

    M.Sc. Electronic Engineering, Politecnico di Torino (Italy)

  • 2004-2009

    B.Sc. Electronic Engineering, Universidad Nacional de Ingenieria (Peru)

Publications

  1. Strobl, J., Solis-Vasquez, L., Lavan, Y., and Koch, A. (2024). Graphtoy: Fast Software Simulation of Applications for AMD’s AI Engines. In Applied Reconfigurable Computing. Architectures, Tools, and Applications. Springer International Publishing. doi: 10.1007/978-3-031-55673-9_12
    Preprint DOI Slides
    Bibtex
    @inproceedings{strobl2024arc,
      author = {Strobl, Jonathan and Solis-Vasquez, Leonardo and Lavan, Yannick and Koch, Andreas},
      title = {Graphtoy: Fast Software Simulation of Applications for AMD’s AI Engines},
      booktitle = {Applied Reconfigurable Computing. Architectures, Tools, and Applications},
      year = {2024},
      publisher = {Springer International Publishing},
      doi = {10.1007/978-3-031-55673-9_12}
    }
    
  2. Weckert, C., Solis-Vasquez, L., Oppermann, J., Koch, A., and Sinnen, O. (2023). Altis-SYCL: Migrating Altis Benchmarking Suite from CUDA to SYCL for GPUs and FPGAs. In Proceedings of the SC ’23 Workshops of The International Conference on High Performance Computing, Network, Storage, and Analysis. Association for Computing Machinery. doi: 10.1145/3624062.3624542
    Preprint DOI Slides
    Bibtex
    @inproceedings{weckert2023h2rc,
      author = {Weckert, Christoph and Solis-Vasquez, Leonardo and Oppermann, Julian and Koch, Andreas and Sinnen, Oliver},
      title = {Altis-SYCL: Migrating Altis Benchmarking Suite from CUDA to SYCL for GPUs and FPGAs},
      booktitle = {Proceedings of the SC '23 Workshops of The International Conference on High Performance Computing, Network, Storage, and Analysis},
      year = {2023},
      publisher = {Association for Computing Machinery},
      doi = {10.1145/3624062.3624542}
    }
    
  3. Solis-Vasquez, L., Mascarenhas, E., and Koch, A. (2023). Experiences Migrating CUDA to SYCL: A Molecular Docking Case Study. In Proceedings of the 2023 International Workshop on OpenCL. Association for Computing Machinery. doi: 10.1145/3585341.3585372
    Preprint DOI Slides
    Bibtex
    @inproceedings{solis2023iwocl,
      author = {Solis-Vasquez, Leonardo and Mascarenhas, Edward and Koch, Andreas},
      title = {Experiences Migrating CUDA to SYCL: A Molecular Docking Case Study},
      booktitle = {Proceedings of the 2023 International Workshop on OpenCL},
      year = {2023},
      publisher = {Association for Computing Machinery},
      doi = {10.1145/3585341.3585372}
    }
    
  4. Solis-Vasquez, L., Focht, E., and Koch, A. (2023). Simulating Molecular Docking on the SX-Aurora TSUBASA Vector Engine. In M. M. Resch, J. Gebert, H. Kobayashi, and W. Bez (Eds.), Sustained Simulation Performance 2021 (pp. 21–35). Springer International Publishing. doi: 10.1007/978-3-031-18046-0_2
    DOI Slides
    Bibtex
    @inproceedings{solis2023wssp,
      author = {Solis-Vasquez, Leonardo and Focht, Erich and Koch, Andreas},
      editor = {Resch, Michael M. and Gebert, Johannes and Kobayashi, Hiroaki and Bez, Wolfgang},
      title = {Simulating Molecular Docking on the SX-Aurora TSUBASA Vector Engine},
      booktitle = {Sustained Simulation Performance 2021},
      year = {2023},
      publisher = {Springer International Publishing},
      pages = {21--35},
      doi = {10.1007/978-3-031-18046-0_2},
      slides = {https://sx-aurora.github.io/posts/Molecular-Docking-Simulation}
    }
    
  5. Vinçon, T., Knödler, C., Solis-Vasquez, L., Bernhardt, A., Tamimi, S., Weber, L., Stock, F., et al. (2022). Near-Data Processing in Database Systems on Native Computational Storage under HTAP Workloads. In Proceedings of the VLDB Endowment, Volume 15. doi: 10.14778/3547305.3547307
    DOI Slides Video
    Bibtex
    @inproceedings{vincon2022vldb,
      author = {Vin\c{c}on, Tobias and Kn\"{o}dler, Christian and Solis-Vasquez, Leonardo and Bernhardt, Arthur and Tamimi, Sajjad and Weber, Lukas and Stock, Florian and Koch, Andreas and Petrov, Ilia},
      title = {Near-Data Processing in Database Systems on Native Computational Storage under HTAP Workloads},
      booktitle = {Proceedings of the VLDB Endowment, Volume 15},
      year = {2022},
      doi = {10.14778/3547305.3547307},
      slides = {https://dblab.reutlingen-university.de/media/2022_VLDB_NDPunderHTAP.pdf},
      video = {https://dblab.reutlingen-university.de/media/2022_VLDB_NDPunderHTAP.mp4}
    }
    
  6. Vinçon, T., Knödler, C., Bernhardt, A., Solis-Vasquez, L., Weber, L., Koch, A., and Petrov, I. (2022). Result-Set Management for NDP Operations on Smart Storage. In 18th International Workshop on Data Management on New Hardware (DaMoN). doi: 10.1145/3533737.3535097
    Preprint DOI Video
    Bibtex
    @inproceedings{vincon2022damon,
      author = {Vin\c{c}on, Tobias and Kn\"{o}dler, Christian and Bernhardt, Arthur and Solis-Vasquez, Leonardo and Weber, Lukas and Koch, Andreas and Petrov, Ilia},
      title = {Result-Set Management for NDP Operations on Smart Storage},
      booktitle = {18th International Workshop on Data Management on New Hardware (DaMoN)},
      year = {2022},
      doi = {10.1145/3533737.3535097},
      preprint = {https://dblab.reutlingen-university.de/paper/2022_DAMON_NDPResultSetHandling_extended.pdf},
      video = {https://dblab.reutlingen-university.de/paper/2022_DaMoN_resultsetMgmtRecording.mp4}
    }
    
  7. Solis-Vasquez, L., Tillack, A. F., Santos-Martins, D., Koch, A., LeGrand, S., and Forli, S. (2021). Benchmarking the performance of irregular computations in AutoDock-GPU molecular docking. Parallel Computing. doi: 10.1016/j.parco.2021.102861
    Preprint DOI
    Bibtex
    @article{solis2021parcosi,
      title = {Benchmarking the performance of irregular computations in AutoDock-GPU molecular docking},
      author = {Solis-Vasquez, Leonardo and Tillack, Andreas F. and Santos-Martins, Diogo and Koch, Andreas and LeGrand, Scott and Forli, Stefano},
      journal = {Parallel Computing},
      year = {2021},
      volume = {},
      number = {},
      pages = {},
      doi = {10.1016/j.parco.2021.102861}
    }
    
  8. Solis-Vasquez, L., Focht, E., and Koch, A. (2021). Mapping Irregular Computations for Molecular Docking to the SX-Aurora TSUBASA Vector Engine. In 11th Workshop on Irregular Applications: Architectures and Algorithms (IA3). doi: 10.1109/IA354616.2021.00008
    Preprint DOI Slides Material
    Bibtex
    @inproceedings{solis2021ia3,
      title = {Mapping Irregular Computations for Molecular Docking to the SX-Aurora TSUBASA Vector Engine},
      author = {Solis-Vasquez, Leonardo and Focht, Erich and Koch, Andreas},
      booktitle = {11th Workshop on Irregular Applications: Architectures and Algorithms (IA3)},
      year = {2021},
      doi = {10.1109/IA354616.2021.00008},
      material = {https://github.com/L30nardoSV/reproduce-ia3-2021-moldocking-vector}
    }
    
  9. Solis-Vasquez, L., Focht, E., and Koch, A. (2021). Porting and Optimizing Molecular Docking onto the SX-Aurora TSUBASA Vector Computer. Supercomputing Frontiers and Innovations (JSFI), 8(2), 27–42. doi: 10.14529/jsfi210202
    DOI
    Bibtex
    @article{solis2021jsfi,
      title = {Porting and Optimizing Molecular Docking onto the SX-Aurora TSUBASA Vector Computer},
      author = {Solis-Vasquez, Leonardo and Focht, Erich and Koch, Andreas},
      journal = {Supercomputing Frontiers and Innovations (JSFI)},
      year = {2021},
      volume = {8},
      number = {2},
      pages = {27-42},
      doi = {10.14529/jsfi210202}
    }
    
  10. Weber, L., Sommer, L., Solis-Vasquez, L., Vinçon, T., Knödler, C., Bernhardt, A., Petrov, I., et al. (2021). A Framework for the Automatic Generation of FPGA-based Near-Data Processing Accelerators in Smart Storage Systems. In 2021 IEEE International Parallel and Distributed Processing Symposium Workshops (IPDPSW) (pp. 136–143). doi: 10.1109/IPDPSW52791.2021.00028
    Preprint DOI Slides Video
    Bibtex
    @inproceedings{weber2021raw,
      author = {Weber, Lukas and Sommer, Lukas and Solis-Vasquez, Leonardo and Vinçon, Tobias and Knödler, Christian and Bernhardt, Arthur and Petrov, Ilia and Koch, Andreas},
      booktitle = {2021 IEEE International Parallel and Distributed Processing Symposium Workshops (IPDPSW)},
      title = {A Framework for the Automatic Generation of FPGA-based Near-Data Processing Accelerators in Smart Storage Systems},
      year = {2021},
      volume = {},
      number = {},
      pages = {136-143},
      doi = {10.1109/IPDPSW52791.2021.00028},
      video = {https://www.youtube.com/watch?v=8d6DkVJVwc0&list=PLewc2qlpcOueI2cuqtHqopIcmmLCU0Cvn&index=10&ab_channel=NECSTLab}
    }
    
  11. Knödler, C., Vinçon, T., Bernhardt, A., Petrov, I., Solis-Vasquez, L., Weber, L., and Koch, A. (2021). A Cost Model for NDP-Aware Query Optimization for KV-Stores. In 17th International Workshop on Data Management on New Hardware (DaMoN). doi: 10.1145/3465998.3466013
    Preprint DOI
    Bibtex
    @inproceedings{knoedler2021damon,
      title = {A Cost Model for NDP-Aware Query Optimization for KV-Stores},
      author = {Kn\"{o}dler, Christian and Vin\c{c}on, Tobias and Bernhardt, Arthur and Petrov, Ilia and Solis-Vasquez, Leonardo and Weber, Lukas and Koch, Andreas},
      booktitle = {17th International Workshop on Data Management on New Hardware (DaMoN)},
      year = {2021},
      doi = {10.1145/3465998.3466013}
    }
    
  12. Weber, L., Vincon, T., Knödler, C., Solis-Vasquez, L., Bernhardt, A., Petrov, I., and Koch, A. (2021). On the necessity of explicit cross-layer data formats in near-data processing systems. Distributed and Parallel Databases. doi: 10.1007/s10619-021-07328-z
    DOI
    Bibtex
    @article{weber2021dapd,
      title = {On the necessity of explicit cross-layer data formats in near-data processing systems},
      author = {Weber, Lukas and Vincon, Tobias and Knödler, Christian and Solis-Vasquez, Leonardo and Bernhardt, Arthur and Petrov, Ilia and Koch, Andreas},
      journal = {Distributed and Parallel Databases},
      year = {2021},
      doi = {10.1007/s10619-021-07328-z}
    }
    
  13. Santos-Martins, D., Solis-Vasquez, L., Tillack, A. F., Sanner, M. F., Koch, A., and Forli, S. (2021). Accelerating AutoDock4 with GPUs and Gradient-Based Local Search. Journal of Chemical Theory and Computation (JCTC). doi: 10.1021/acs.jctc.0c01006
    Preprint DOI
    Bibtex
    @article{solis2020jctc,
      title = {Accelerating AutoDock4 with GPUs and Gradient-Based Local Search},
      author = {Santos-Martins, Diogo and Solis-Vasquez, Leonardo and Tillack, Andreas F and Sanner, Michel F and Koch, Andreas and Forli, Stefano},
      journal = {Journal of Chemical Theory and Computation (JCTC)},
      year = {2021},
      doi = {10.1021/acs.jctc.0c01006},
      preprint = {https://chemrxiv.org/engage/chemrxiv/article-details/60c743f4702a9b2ad818a6f7}
    }
    
  14. Solis-Vasquez, L., Santos-Martins, D., Tillack, A. F., Koch, A., Eberhardt, J., and Forli, S. (2020). Parallelizing Irregular Computations for Molecular Docking. In 10th Workshop on Irregular Applications: Architectures and Algorithms (IA3). doi: 10.1109/IA351965.2020.00008
    Preprint DOI Slides Material
    Bibtex
    @inproceedings{solis2020ia3,
      author = {Solis-Vasquez, Leonardo and Santos-Martins, Diogo and Tillack, Andreas F. and Koch, Andreas and Eberhardt, J\'{e}r\^{o}me and Forli, Stefano},
      title = {Parallelizing Irregular Computations for Molecular Docking},
      booktitle = {10th Workshop on Irregular Applications: Architectures and Algorithms (IA3)},
      year = {2020},
      doi = {10.1109/IA351965.2020.00008},
      material = {https://github.com/L30nardoSV/reproduce-ia3-moleculardocking}
    }
    
  15. LeGrand, S., Scheinberg, A., Tillack, A. F., Thavappiragasam, M., Vermaas, J. V., Agarwal, R., Larkin, J., et al. (2020). GPU-Accelerated Drug Discovery with Docking on the Summit Supercomputer: Porting, Optimization, and Application to COVID-19 Research. In Proceedings of the 11th ACM International Conference on Bioinformatics, Computational Biology and Health Informatics (BCB). doi: 10.1145/3388440.3412472
    Preprint DOI
    Bibtex
    @inproceedings{legrand2020bcb,
      author = {LeGrand, Scott and Scheinberg, Aaron and Tillack, Andreas F. and Thavappiragasam, Mathialakan and Vermaas, Josh V. and Agarwal, Rupesh and Larkin, Jeff and Poole, Duncan and Santos-Martins, Diogo and Solis-Vasquez, Leonardo and Koch, Andreas and Forli, Stefano and Hernandez, Oscar and Smith, Jeremy C. and Sedova, Ada},
      title = {GPU-Accelerated Drug Discovery with Docking on the Summit Supercomputer: Porting, Optimization, and Application to COVID-19 Research},
      booktitle = {Proceedings of the 11th ACM International Conference on Bioinformatics, Computational Biology and Health Informatics (BCB)},
      year = {2020},
      preprint = {https://arxiv.org/abs/2007.03678},
      doi = {10.1145/3388440.3412472}
    }
    
  16. Vinçon, T., Weber, L., Bernhardt, A., Riegger, C., Hardock, S., Knoedler, C., Stock, F., et al. (2020). nKV in Action: Accelerating KV-Stores on Native Computation Storage with Near-Data Processing. In Proceedings of the VLDB Endowment, Volume 13. doi: 10.14778/3415478.3415524
    Preprint DOI Slides Video
    Bibtex
    @inproceedings{weber2020vldb,
      author = {Vin\c{c}on, Tobias and Weber, Lukas and Bernhardt, Arthur and Riegger, Christian and Hardock, Sergey and Knoedler, Christian and Stock, Florian and Solis-Vasquez, Leonardo and Tamimi, Sajjad and Koch, Andreas},
      title = {nKV in Action: Accelerating KV-Stores on Native Computation Storage with Near-Data Processing},
      booktitle = {Proceedings of the VLDB Endowment, Volume 13},
      year = {2020},
      doi = {10.14778/3415478.3415524},
      video = {https://www.youtube.com/watch?v=iiGh6Pj_A9k}
    }
    
  17. Sommer, L., Stock, F., Solis-Vasquez, L., and Koch, A. (2020). DAPHNE - An Automotive Benchmark Suite for Parallel Programming Models on Embedded Heterogeneous Platforms. In D. Ziegenbein, S. Saidi, X. S. Hu, and S. Steinhorst (Eds.), Future Automotive HW/SW Platform Design (Dagstuhl Seminar 19502), Dagstuhl Reports (Vol. 9, pp. 28–66). Dagstuhl, Germany: Schloss Dagstuhl–Leibniz-Zentrum fuer Informatik. doi: 10.4230/DagRep.9.12.28
    DOI URL
    Bibtex
    @inproceedings{sommer2020dagstuhl,
      author = {Sommer, Lukas and Stock, Florian and Solis-Vasquez, Leonardo and Koch, Andreas},
      title = {DAPHNE - An Automotive Benchmark Suite for Parallel Programming Models on Embedded Heterogeneous Platforms},
      booktitle = {{{Future Automotive HW/SW Platform Design (Dagstuhl Seminar 19502)}}},
      year = {2020},
      editor = {Ziegenbein, Dirk and Saidi, Selma and Hu, Xiaobo Sharon and Steinhorst, Sebastian},
      volume = {9},
      series = {Dagstuhl Reports},
      pages = {28--66},
      publisher = {{Schloss Dagstuhl--Leibniz-Zentrum fuer Informatik}},
      address = {Dagstuhl, Germany},
      url = {https://drops.dagstuhl.de/opus/volltexte/2020/12010},
      urn = {urn:nbn:de:0030-drops-120101},
      doi = {10.4230/DagRep.9.12.28},
      annote = {Keywords: automotive, hw/sw platforms, real-time systems, systems design automation}
    }
    
  18. Solis-Vasquez, L., Santos-Martins, D., Koch, A., and Forli, S. (2020). Evaluating the Energy Efficiency of OpenCL-accelerated AutoDock Molecular Docking. In 28th EUROMICRO International Conference on Parallel, Distributed and Network-Based Processing (PDP’20). doi: 10.1109/PDP50117.2020.00031
    Preprint DOI Slides
    Bibtex
    @inproceedings{solis2020pdp,
      author = {Solis-Vasquez, Leonardo and Santos-Martins, Diogo and Koch, Andreas and Forli, Stefano},
      booktitle = {28th EUROMICRO International Conference on Parallel, Distributed and Network-Based Processing (PDP'20)},
      title = {Evaluating the Energy Efficiency of OpenCL-accelerated AutoDock Molecular Docking},
      year = {2020},
      doi = {10.1109/PDP50117.2020.00031}
    }
    
  19. Sommer, L., Stock, F., Solis-Vasquez, L., and Koch, A. (2020). Using Parallel Programming Models for Automotive Workloads on Heterogeneous Systems - a Case Study. In 28th EUROMICRO International Conference on Parallel, Distributed and Network-Based Processing (PDP’20). doi: 10.1109/PDP50117.2020.00010
    Preprint DOI
    Bibtex
    @inproceedings{sommer2020pdp,
      author = {Sommer, Lukas and Stock, Florian and Solis-Vasquez, Leonardo and Koch, Andreas},
      booktitle = {28th EUROMICRO International Conference on Parallel, Distributed and Network-Based Processing (PDP'20)},
      title = {Using Parallel Programming Models for Automotive Workloads on Heterogeneous Systems - a Case Study},
      year = {2020},
      doi = {10.1109/PDP50117.2020.00010},
      keywords = {embedded, automotive, parallel programming, heterogeneous, OpenMP, OpenCL, CUDA}
    }
    
  20. Solis-Vasquez, L. (2019). Accelerating Molecular Docking by Parallelized Heterogeneous Computing - A Case Study of Performance, Quality of Results, and Energy-Efficiency using CPUs, GPUs, and FPGAs (PhD thesis). Technische Universität Darmstadt, Germany.
    DOI
    Bibtex
    @phdthesis{solis2019diss,
      author = {Solis-Vasquez, Leonardo},
      title = {Accelerating Molecular Docking by Parallelized Heterogeneous Computing - 
                     A Case Study of Performance, Quality of Results, and Energy-Efficiency 
                     using CPUs, GPUs, and FPGAs},
      school = {Technische Universität Darmstadt, Germany},
      year = {2019},
      doi = {10.25534/tuprints-00009288}
    }
    
  21. Santos-Martins, D., Eberhardt, J., Bianco, G., Solis-Vasquez, L., Ambrosio, F. A., Koch, A., and Forli, S. (2019). D3R Grand Challenge 4: prospective pose prediction of BACE1 ligands with AutoDock-GPU. Journal of Computer-Aided Molecular Design. doi: 10.1007/s10822-019-00241-9
    DOI
    Bibtex
    @article{santosmartins2019posepred,
      title = {D3R Grand Challenge 4: prospective pose prediction of BACE1 ligands with AutoDock-GPU},
      author = {Santos-Martins, Diogo and Eberhardt, Jerome and Bianco, Giulia and Solis-Vasquez, Leonardo and Ambrosio, Francesca Alessandra and Koch, Andreas and Forli, Stefano},
      journal = {Journal of Computer-Aided Molecular Design},
      year = {2019},
      doi = {10.1007/s10822-019-00241-9}
    }
    
  22. El Khoury, L., Santos-Martins, D., Sasmal, S., Eberhardt, J., Bianco, G., Ambrosio, F. A., Solis-Vasquez, L., et al. (2019). Comparison of affinity ranking using AutoDock-GPU and MM-GBSA scores for BACE-1 inhibitors in the D3R Grand Challenge 4. Journal of Computer-Aided Molecular Design. doi: 10.1007/s10822-019-00240-w
    DOI
    Bibtex
    @article{elkhoury2019affrank,
      title = {Comparison of affinity ranking using AutoDock-GPU and MM-GBSA scores for BACE-1 inhibitors in the D3R Grand Challenge 4},
      author = {El Khoury, L{\'e}a and Santos-Martins, Diogo and Sasmal, Sukanya and Eberhardt, J{\'e}r{\^o}me and Bianco, Giulia and Ambrosio, Francesca Alessandra and Solis-Vasquez, Leonardo and Koch, Andreas and Forli, Stefano and Mobley, David L.},
      journal = {Journal of Computer-Aided Molecular Design},
      year = {2019},
      doi = {10.1007/s10822-019-00240-w}
    }
    
  23. Sommer, L., Stock, F., Solis-Vasquez, L., and Koch, A. (2019). Work-in-Progress: DAPHNE - Automotive Benchmark Suite for Parallel Programming Models on Embedded Heterogeneous Platforms. In Proceedings of the International Conference on Embedded Software (accepted for publication 07/2019), EMSOFT ’19. Piscataway, NJ, USA: IEEE Press. doi: 10.1145/3349568.3351547
    Preprint DOI
    Bibtex
    @inproceedings{emsoft2019,
      author = {Sommer, Lukas and Stock, Florian and Solis-Vasquez, Leonardo and Koch, Andreas},
      title = {Work-in-Progress: DAPHNE - Automotive Benchmark Suite for Parallel Programming Models on Embedded Heterogeneous Platforms},
      booktitle = {Proceedings of the International Conference on Embedded Software (accepted for publication 07/2019)},
      series = {EMSOFT '19},
      year = {2019},
      location = {New York, NY, USA},
      publisher = {IEEE Press},
      address = {Piscataway, NJ, USA},
      doi = {10.1145/3349568.3351547}
    }
    
  24. Sommer, L., Stock, F., Solis-Vasquez, L., and Koch, A. (2019). EPHoS: Evaluation of Programming - Models for Heterogeneous Systems. FAT-Schriftenreihe 317. Forschungsvereinigung Automobiltechik. Retrieved from https://www.vda.de/de/services/Publikationen/fat-schriftenreihe-317.html
    URL
    Bibtex
    @article{fat317,
      title = {EPHoS: Evaluation of Programming - Models for Heterogeneous Systems},
      author = {Sommer, Lukas and Stock, Florian and Solis-Vasquez, Leonardo and Koch, Andreas},
      booktitle = {FAT-Schriftenreihe 317},
      year = {2019},
      publisher = {Forschungsvereinigung Automobiltechik},
      url = {https://www.vda.de/de/services/Publikationen/fat-schriftenreihe-317.html}
    }
    
  25. Solis-Vasquez, L., and Koch, A. (2018). A Case Study in Using OpenCL on FPGAs: Creating an Open-Source Accelerator of the AutoDock Molecular Docking Software. In Fifth International Workshop on FPGAs for Software Programmers (FSP). Retrieved from https://ieeexplore.ieee.org/document/8470463
    Preprint URL Slides Material
    Bibtex
    @inproceedings{solis-vasquez2018acsuoclfpgacosaadmds,
      title = {A Case Study in Using OpenCL on FPGAs: Creating an Open-Source Accelerator of the AutoDock Molecular Docking Software},
      author = {Solis-Vasquez, Leonardo and Koch, Andreas},
      booktitle = {Fifth International Workshop on FPGAs for Software Programmers (FSP)},
      year = {2018},
      url = {https://ieeexplore.ieee.org/document/8470463},
      material = {https://git.esa.informatik.tu-darmstadt.de/docking/ocladock-fpga}
    }
    
  26. Solis-Vasquez, L., and Koch, A. (2017). A Performance and Energy Evaluation of OpenCL-accelerated Molecular Docking. In Fifth International Workshop on OpenCL (IWOCL). doi: 10.1145/3078155.3078167
    Preprint DOI Slides Material
    Bibtex
    @inproceedings{solis-vasquez2017apeeoclmd,
      title = {A Performance and Energy Evaluation of OpenCL-accelerated Molecular Docking},
      author = {Solis-Vasquez, Leonardo and Koch, Andreas},
      booktitle = {Fifth International Workshop on OpenCL (IWOCL)},
      year = {2017},
      doi = {10.1145/3078155.3078167},
      material = {https://git.esa.informatik.tu-darmstadt.de/docking/ocladock}
    }